Cheesy Bacon Egg Muffin Cups

by September 13, 2026
4 minutes read

These fluffy, golden baked egg cups are loaded with crispy bacon, melted cheese, herbs, and fluffy eggs. They’re perfect for breakfast, meal prep, or a quick high-protein snack.

 Ingredients

Egg Mixture

  • 8 large eggs
  • ½ cup milk or heavy cream
  • ½ cup shredded cheddar cheese
  • ¼ cup shredded mozzarella
  • 4 slices bacon, cooked and crumbled
  • 2 tablespoons finely chopped green onion or chives
  • ¼ teaspoon garlic powder
  • ¼ teaspoon onion powder
  • ½ teaspoon salt
  • ¼ teaspoon black pepper
  • 1 tablespoon chopped fresh parsley or chives

For the Tops

  • ¼ cup extra shredded cheddar cheese
  • 1 tablespoon chopped chives
  • 1–2 slices cooked bacon, finely crumbled
  • Optional: pinch of paprika

👩‍🍳 Instructions

1. Prepare the bacon

Cook the bacon in a skillet until crisp. Transfer to a paper towel-lined plate and allow it to cool slightly.

Crumble the bacon into small pieces.

2. Prepare the oven

Preheat your oven to 375°F (190°C).

Grease a 6-cup jumbo muffin pan generously with cooking spray or butter. You can also use a standard 12-cup muffin pan for smaller portions.

3. Make the egg mixture

In a large bowl, whisk together:

  • Eggs
  • Milk or cream
  • Salt
  • Black pepper
  • Garlic powder
  • Onion powder

Whisk until well combined and slightly frothy.

4. Add the fillings

Fold in the:

  • Cheddar
  • Mozzarella
  • Crumbled bacon
  • Green onion
  • Parsley or chives

Mix gently so everything is evenly distributed.

5. Fill the muffin cups

Divide the mixture among the prepared muffin cups, filling each about ¾ full.

Don’t fill them completely because the eggs will puff up while baking.

6. Add the topping

Sprinkle the remaining cheddar and bacon over each egg cup.

Add a little chopped chive and paprika if desired.

7. Bake

Bake for approximately 20–25 minutes, or until the centers are completely set and the tops are golden brown.

For jumbo cups, you may need 25–30 minutes.

8. Rest and serve

Allow the egg cups to cool for 5 minutes before removing them from the pan.

Run a small silicone spatula or butter knife around the edges if necessary.

Serve warm with extra fresh herbs.

🧀 Variations

Spinach & Feta:
Add ½ cup chopped spinach and replace some of the cheddar with crumbled feta.

Mushroom & Swiss:
Add ½ cup sautéed mushrooms and use Swiss cheese.

Chicken & Cheese:
Replace the bacon with ¾ cup cooked shredded chicken.

Vegetable:
Add diced bell pepper, spinach, mushrooms, or zucchini. Sauté watery vegetables first so the egg cups don’t become soggy.

🌰 Nut & Allergen Information

  • Nuts: None
  • Peanuts: None
  • Dairy: Yes — milk, cheddar, and mozzarella
  • Eggs: Yes
  • Gluten: Naturally gluten-free, but check bacon and packaged cheese labels
  • Soy: Usually none, but check processed bacon labels
  • Sesame: None

Nut-free

The recipe is naturally nut-free. If preparing for someone with a serious nut allergy, check all packaged ingredients for cross-contact warnings.

Dairy-free

Use unsweetened dairy-free milk and dairy-free shredded cheese.

🧊 Storage & Meal Prep

Refrigerator:
Store cooled egg cups in an airtight container for up to 4 days.

Freezer:
Freeze individually wrapped egg cups for up to 2 months.

Reheating:
Microwave refrigerated egg cups for about 30–60 seconds. Frozen egg cups can be thawed overnight and reheated.

❓ Q&A

Why did my egg cups become watery?
Watery vegetables, too much milk, or undercooking can cause this. Sauté vegetables first and bake until the centers are fully set.

Why did they puff up and then shrink?
That’s completely normal. Eggs naturally expand in the oven and settle as they cool.

Can I make these without bacon?
Yes. Add spinach, mushrooms, peppers, turkey, or extra cheese instead.

Can I use cottage cheese?
Absolutely. Add ½ cup cottage cheese for an extra-creamy texture and more protein.

Can I use only cheddar?
Yes. You can replace the mozzarella with additional cheddar.

Can I make mini versions?
Yes. Use a mini muffin pan and reduce the baking time to roughly 10–15 minutes, checking that the centers are set.

How do I prevent sticking?
Grease the muffin cups very well, or use silicone muffin cups.

Can I prepare them the night before?
Yes. Bake them ahead, refrigerate, and reheat in the morning.

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Sara Mitchell is an expert restaurant content creator who writes easy-to-read guides about CAVA and other Mediterranean fast-casual chains in the United States. She covers locations, menus, prices, and hours, making it simple for visitors to find nearby restaurants and what to order quickly. With years of experience in restaurant research and local SEO, Sara creates accurate, user-friendly guides that work for both people and search engines. Her goal is to help users go from search results to their nearest restaurant or menu choice with as few clicks as possible.

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